Campus Units

Genome Informatics Facility, Animal Science

Document Type

Article

Publication Version

Published Version

Publication Date

12-2015

Journal or Book Title

Genomics Data

Volume

6

First Page

67

Last Page

69

DOI

10.1016/j.gdata.2015.08.009

Abstract

In this study, the tail muscle microbiota of pacific white shrimp (Litopenaeus vannamei) sourced from five countries across Central and South America and Southeast Asia were determined and compared. The genomic DNA was sequenced at around 10 × coverage for each geographical location and was assembled de novo for comparative analysis. The assembled sequences for all the lines were classified based on their similarity to the sequences in the public database. We found that there is high correlation among the microbiota of shrimp from disparate regions, as well as the presence of some DNA from bacteria known to cause food poisoning in humans. Sequencing data has been deposited at NCBI-SRA database and can be found under the BioProject ID PRJNA282154.

Comments

This article is from Genomics Data 6 (2015): 67–69, doi:10.1016/j.gdata.2015.08.009. Posted with permission.

Rights

This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

Copyright Owner

The Authors

Language

en

File Format

application/pdf

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