Agricultural and Biosystems Engineering Publications

 
This series contains articles and book chapters authored or co-authored by faculty, students and staff of the Department of Agricultural and Biosystems Engineering at Iowa State University.

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Publications from 2019

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Field-based architectural traits characterisation of maize plant using time-of-flight 3D imaging, Yin Bao, Lie Tang, Srikant Srinivasan, and Patrick S. Schnable

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Stomatal Conductance Measurement for Toxicity Assessment in Zero-Effluent Constructed Wetlands: Effects of Landfill Leachate on Hydrophytes, Andrzej Białowiec, Jacek A. Koziel, and Piotr Manczarski

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Waste to Carbon: Influence of Structural Modification on VOC Emission Kinetics from Stored Carbonized Refuse-Derived Fuel, Andrzej Białowiec, Monika Micuda, Antoni Szumny, Jacek Łyczko, and Jacek A. Koziel

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Mitigating Particulate Matter Generations in a Commercial Cage-free Henhouse, Lilong Chai, Hongwei Xin, Yu Wang, Jofran Oliveira, Kailao Wang, and Yang Zhao

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Techno-Economic Analysis of Extruding-Expelling of Soybeans to Produce Oil and Meal, Ming-Hsun Chen and Kurt A. Rosentrater

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Comparison of product distribution, content and fermentability of biomass in a hybrid thermochemical/biological processing platform, Zhanyou Chi, Xuefei Zhao, Tannon Daugaard, Dustin Dalluge, Marjorie Rover, Patrick Johnston, Andre M. Salazar, Miguel C. Santoscoy, Ryan G. Smith, Robert C. Brown, Zhiyou Wen, Olga A. Zabotina, and Laura R. Jarboe

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The Effect of Biochar Addition on the Biogas Production Kinetics from the Anaerobic Digestion of Brewers’ Spent Grain, Marta Dudek, Kacper Świechowski, Piotr Manczarski, Jacek A. Koziel, and Andrzej Białowiec

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RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids, Taylor K. Dunivin, Jinlyung Choi, Adina Howe, and Ashley Shade

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Characterization of an Air-to-Air Heat Exchanger for Manure Belt Drying Ventilation in an Aviary Laying Hen House, Y. S. M. Goselink and Brett C. Ramirez

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Incremental Cost Analysis of First-Year Course Innovations, John R. Haughery and D. Raj Raman

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Evaluating machine learning performance in predicting injury severity in agribusiness industries, Fatemeh Davoudi Kakhki, Steven A. Freeman, and Gretchen A. Mosher

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Modeling solid-phase microextraction of volatile organic compounds by porous coatings using finite element analysis, Bulat Kenessov, Miras Derbissalin, Jacek A. Koziel, and Dmitry S. Kosyakov

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Data evidencing slow anaerobic digestion in emergency treatment and disposal of infectious animal carcasses, Jacek A. Koziel, Heekwon Ahn, Thomas D. Glanville, Timothy S. Frana, J. (Hans) van Leeuwen, and Lam T. Nguyen

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Development and application of an image acquisition system for characterizing sow behaviors in farrowing stalls, Suzanne M. Leonard, Hongwei Xin, T. M. Brown-Brandl, and Brett C. Ramirez

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Accelerated accumulation of retinal α-synuclein (pSer129) and tau, neuroinflammation, and autophagic dysregulation in a seeded mouse model of Parkinson's disease, Najiba Mammadova, Corey M. Summers, Robyn D. Kokemuller, Qing He, Shaowei Ding, Thierry Baron, Chenxu Yu, Rudy J. Valentine, Donald S. Sakaguchi, Anumantha G. Kanthasamy, Justin J. Greenlee, and M. Heather West Greenlee

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Impact of hydraulic residence time on nitrate removal in pilot-scale woodchip bioreactors, E. A. Martin, Morgan P. Davis, Thomas B. Moorman, Thomas M. Isenhart, and Michelle L. Soupir

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Remote sensing of large reservoir in the drought years: Implications on surface water change and turbidity variability of Sobradinho reservoir (Northeast Brazil), Vitor S. Martins, Amy Kaleita, Claudio C.F. Barbosa, Alice C. Fassoni-Andrade, Felipe de Lucia Lobo, and Evlyn M.L.M. Novo

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Global validation of columnar water vapor derived from EOS MODIS-MAIAC algorithm against the ground-based AERONET observations, Vitor S. Martins, Alexei Lyapustin, Yujie Wang, David M. Giles, Alexander Smirnov, Ilya Slutsker, and Sergey Korkin

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On-farm pilot-scale testing of black ultraviolet light and photocatalytic coating for mitigation of odor, odorous VOCs, and greenhouse gases, Devin L. Maurer and Jacek A. Koziel

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Heat stress adaptations in pigs, Edith J. Mayorga, David Renaudeau, Brett C. Ramirez, Jason W. Ross, and Lance H. Baumgard

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Regenerating Agricultural Landscapes with Perennial Groundcover for Intensive Crop Production, Kenneth J. Moore, Robert P. Anex, Amani E. Elobeid, Shuizhang Fei, Cornelia B. Flora, A. Susana Goggi, Keri L. Jacobs, Prashant Jha, Amy L. Kaleita, Douglas L. Karlen, David A. Laird, Andrew W. Lenssen, Thomas Lubberstedt, Marshall D. McDaniel, D. Raj Raman, and Sharon L. Weyers

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Overview of Some Recent Advances in Improving Water and Energy Efficiencies in Food Processing Factories, Nooshin Nikmaram and Kurt A. Rosentrater

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Torrefaction of Sewage Sludge: Kinetics and Fuel Properties of Biochars, Jakub Pulka, Piotr Manczarski, Jacek A. Koziel, and Andrzej Białowiec

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Biogenic Volatiles Emitted from Four Cold-Hardy Grape Cultivars During Ripening, Somchai Rice, Devin L. Maurer, Anne Fennell, Murlidhar Dharmadhikari, and Jacek A. Koziel

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Evaluation of Volatile Metabolites Emitted In-Vivo from Cold-Hardy Grapes during Ripening Using SPME and GC-MS: A Proof-of-Concept, Somchai Rice, Devin L. Maurer, Anne Fennell, Murlidhar Dharmadhikari, and Jacek A. Koziel

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Effects of Harvest Time on the Aroma of White Wines Made from Cold-Hardy Brianna and Frontenac Gris Grapes Using Headspace Solid-Phase Microextraction and Gas Chromatography-Mass Spectrometry-Olfactometry, Somchai Rice, Madina Tursumbayeva, Matthew Clark, David Greenlee, Murlidhar Dharmadhikari, Anne Fennell, and Jacek A. Koziel

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The Development of the INFEWS-ER: A Virtual Resource Center for Transdisciplinary Graduate Student Training at the Nexus of Food, Energy, and Water, Luis F. Rodríguez, Anna-Maria Marshall, Dan Cotton, Richard Koelsch, Jacek A. Koziel, Deanne Meyer, Dan Steward, Jill Heemstra, Anand Padmanabahn, John Classen, Nathan J. Meyer, Benjamin L. Ruddell, Sean M. Ryan, Ximing Cai, Emad Habib, and Peter D. Saundry

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Measuring Sub-Second Wind Velocity Changes for Agricultural Drift One Meter Above the Ground, Matthew W. Schramm, H. Mark Hanna, Matthew J. Darr, Steven J. Hoff, and Brian L. Steward

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Quantification of Site Layout and Filter Characteristics on Primary Filter Airflow Reduction on Commercial Swine Sites in Iowa, Benjamin Smith, Steven Hoff, Jay Harmon, Daniel Andersen, Jeffrey Zimmerman, and John Stinn

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Analysis of the Spatial and Temporal Distribution of Process Gases within Municipal Biowaste Compost, Sylwia Stegenta, Karolina Sobieraj, Grzegorz Pilarski, Jacek A. Koziel, and Andrzej Białowiec

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The Spatial and Temporal Distribution of Process Gases within the Biowaste Compost, Sylwia Stegenta, Karolina Sobieraj, Grzegorz Pilarski, Jacek A. Koziel, and Andrzej Białowiec

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Waste to Carbon Energy Demand Model and Data Based on the TGA and DSC Analysis of Individual MSW Components, Paweł Stępień, Małgorzata Serowik, Jacek A. Koziel, and Andrzej Białowiec

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The use of agricultural robots in weed management and control, Brian L. Steward, Jingyao Gai, and Lie Tang

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Techno-economic analysis (TEA) and life cycle assessment (LCA) of maize storage for small and middle sized farmers, Rashid Suleiman and Kurt A. Rosentrater

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Physical and Thermal Properties of Chia, Kañiwa, Triticale, and Farro Seeds as a Function of Moisture Content, Rashid Suleiman, Kun Xie, and Kurt A. Rosentrater

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Fuel Properties of Torrefied Biomass from Pruning of Oxytree, Kacper Świechowski, Marek Liszewski, Przemysław Bąbelewski, Jacek A. Koziel, and Andrzej Białowiec

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Oxytree Pruned Biomass Torrefaction: Mathematical Models of the Influence of Temperature and Residence Time on Fuel Properties Improvement, Kacper Świechowski, Marek Liszewski, Przemysław Bąbelewski, Jacek A. Koziel, and Andrzej Białowiec

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Proof-of-the-Concept of Spent Mushrooms Compost Torrefaction - Preliminary Studies of Process Kinetics and the Influence of Temperature and Duration on Calorific Value of the Biochar, Ewa Syguła, Jacek A. Koziel, and Andrzej Białowiec

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Waste to Carbon: Preliminary Research on Mushroom Spent Compost Torrefaction, Ewa Syguła, Jacek A. Koziel, and Andrzej Białowiec

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Development of Time-Weighted Average Sampling of Odorous Volatile Organic Compounds in Air with Solid-Phase Microextraction Fiber Housed inside a GC Glass Liner: Proof of Concept, Madina Tursumbayeva, Jacek A. Koziel, Devin L. Maurer, Bulat Kenessov, and Somchai Rice

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Influence of Amino Acid Supplementations in Juvenile Yellow Perch Fed Plant Protein Combinations, Aaron J. Von Eschen, Michael L. Brown, and Kurt A. Rosentrater

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An RFID-Based Automated Individual Perching Monitoring System for Group-Housed Poultry, Kailao Wang, Kai Liu, Hongwei Xin, Lilong Chai, Yu Wang, Tao Fei, Jofran Oliveira, Jinming Pan, and Yibin Ying

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Evaluation of Semi-Continuous Pit Manure Recharge System Performance on Mitigation of Ammonia and Hydrogen Sulfide Emissions from a Swine Finishing Barn, Jisoo Wi, Seunghun Lee, Eunjong Kim, Myeongseong Lee, Jacek A. Koziel, and Heekwon Ahn

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Postmortem biochemical and textural changes in the Patinopecten yessoensis adductor muscle (PYAM) during iced storage, Xin Xiong, Baoyu He, Di Jiang, Xiufang Dong, Aeneas Koosis, Chenxu Yu, and Hang Qi

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Techno-economic analysis of the production process of structural bio-adhesive derived from glycerol, Minliang Yang and Kurt A. Rosentrater

Publications from 2018

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3D Perception-based Collision-Free Robotic Leaf Probing for Automated Indoor Plant Phenotyping, Yin Bao, Dylan Shah, and Lie Tang

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Field-based Robot Phenotyping of Sorghum Plant Architecture using Stereo Vision, Yin Bao, Lie Tang, Matthew W. Breitzman, Maria G. Salas-Fernandez, and Patrick S. Schnable

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Waste to Carbon: Densification of Torrefied Refuse-Derived Fuel, Andrzej Białowiec, Monika Micuda, and Jacek A. Koziel

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Quantification of VOC Emissions from Carbonized Refuse-Derived Fuel Using Solid-Phase Microextraction and Gas Chromatography-Mass Spectrometry, Andrzej Białowiec, Monika Micuda, Antoni Szumny, Jacek Łyczko, and Jacek A. Koziel

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Catchment-scale Phosphorus Export through Surface and Drainage Pathways, Conrad E. Brendel, Michelle L. Soupir, Leigh Ann M. Long, Matthew J. Helmers, Charles D. Ikenberry, and Amy L. Kaleita

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Utilizing Multivariate Analysis for Assessing Student Learning Through Effective College-Industry Partnerships, Caleb Burns, Shweta Chopra, Mack C. Shelley II, and Gretchen A. Mosher

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Beyond the nutrient strategies: Common ground to accelerate agricultural water quality improvement in the upper Midwest, Center for Watershed Protection, Inc.; Laura Christianson; Center for Watershed Protection, Inc.; Matthew J. Helmers; Gregory McIsaac; David Mulla; and Walton Family Foundation

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Mitigating ammonia and PM generation of cage-free henhouse litter with solid additive and liquid spray, Lilong Chai, Hongwei Xin, Yang Zhao, Tong Wang, Michelle L. Soupir, and Kai Liu

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Challenges in technology adoption in Indian public distribution system: a quality management approach, Varun Chhabra, Shweta Chopra, and Prashant Rajan

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Spatial Structuring of Cellulase Gene Abundance and Activity in Soil, Jinlyung Choi, Elizabeth Bach, Jaejin Lee, Jared Flater, Shane Dooley, Adina Howe, and Kirsten S. Hofmockel

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First-order estimates of the costs, input-output energy analysis, and energy returns on investment of conventional and emerging biofuels feedstocks, Katrina Christiansen, D. Raj Raman, Guiping Hu, and Robert Anex

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Rapid Needs Assessment and Response Technique, Jacqueline Comito, Brandy Case Haub, and Mark Licht

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Effects of Subsurface Drainage Systems on Water and Nitrogen Footprints Simulated with RZWQM2, Kristina Craft, Matthew J. Helmers, Robert W. Malone, Carl H. Pederson, and Linda R. Schott

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Healthy Food as a New Technology—The Implications of Technological Diffusion and Food Price for Changes in Eating Habits, Anne E. Dohmen and D. Raj Raman

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Performance Evaluation of Manure Nitrogen Output Models Suitable for Lactating Dairy Cows in China, Ruilan Dong, Hongmin Dong, Karen A. Beauchemin, and Hongwei Xin

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Nutritional value and flavor of turbot (Scophthalmus maximus) muscle as affected by cooking methods, Xiu-Ping Dong, De-Yang Li, Ying Huang, Qiong Wu, Wen-Tao Liu, Lei Qin, Da-Yong Zhou, Sangeeta Prakash, and Chenxu Yu

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Exploring Natural Models for the ‘Rolling Unmasking Effect’ of Downwind Odor Dispersion; Prairie Verbena, Prehensile-Tailed Porcupine and Virginia Pepperweed, Don Wright & Associates, LLC; Jacek A. Koziel; David B. Parker; Volatile Analysis Corporation Inc.; Thomas G. Hartman; and Paula Kolvig

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Integrating Environmental and Social Sustainability Into Performance Evaluation: A Balanced Scorecard-Based Grey-DANP Approach for the Food Industry, Gazi M. Duman, Murat Taskaynatan, Elif Kongar, and Kurt A. Rosentrater

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Evaluating Row Cover Establishment Systems for Cantaloupe and Summer Squash, H. Mark Hanna, Brian L. Steward, and Kurt A. Rosentrater

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HVAC Techniques for Modern Livestock and Poultry Production Systems, Steven J. Hoff

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Salmonella and Fecal Indicator Bacteria Survival in Soils Amended with Poultry Manure, Claire E. Hruby, Michelle L. Soupir, Thomas B. Moorman, Carl H. Pederson, and Rameshwar S. Kanwar

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New control strategy against temperature sudden-drop in the initial stage of pad cooling process in poultry houses, Xue Hui, Baoming Li, Hongwei Xin, Weichao Zheng, Zhengxiang Shi, Xiao Yang, and Shumei Zhao

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Biomass Production and Composition of Temperate and Tropical Maize in Central Iowa, Pedro Alexander Infante, Ken Moore, Charlie Hurburgh, Paul Scott, Sotirios Archontoulis, Andrew Lenssen, and Shuizhang Fei

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Swine Finishing Room Air Infiltration: Part 1. Quantification and Prediction, Harishchandra T. Jadhav, Steven J. Hoff, Jay D. Harmon, Ignacio Alvarez, Daniel S. Andersen, and Ulrike Passe

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Swine Finishing Room Air Infiltration: Part 2. Infiltration as Affected by Room Characteristics, Harishchandra T. Jadhav, Steven J. Hoff, Jay D. Harmon, and Daniel S. Andersen

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Analyzing Large Workers’ Compensation Claims Using Generalized Linear Models and Monte Carlo Simulation, Fatemeh Davoudi Kakhki, Steven A. Freeman, and Gretchen A. Mosher

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The principles of tomorrow's university, Daniel S. Katz, Adina Howe, Sarah M. Nusser, and et al.

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Optimization of Time-Weighted Average Air Sampling by Solid-Phase Microextraction Fibers Using Finite Element Analysis Software, Bulat Kenessov, Jacek A. Koziel, Nassiba Baimatova, Olga P. Demyanenko, and Miras Derbissalin

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Modelling the influence of crop density and weather conditions on field drying characteristics of switchgrass and maize stover using random forest, Amit Khanchi, Stuart J. Birrell, and Robert B. Mitchell

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Lab-scale evaluation of aerated burial concept for treatment and emergency disposal of infectious animal carcasses, Jacek A. Koziel, Heekwon Ahn, Thomas D. Glanville, Timothy S. Frana, Johannes van Leeuwen, and Lam T. Nguyen

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Exploring multiple operating scenarios to identify low-cost, high nitrate removal strategies for electrically-stimulated woodchip bioreactors, Ji-Yeow Law, Michelle L. Soupir, D. Raj Raman, and Thomas Moorman

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Electrical stimulation for enhanced denitrification in woodchip bioreactors: Opportunities and challenges, J. Y. Law, Michelle L. Soupir, D. Raj Raman, T. B. Moorman, and Say K. Ong

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Fan and Ventilation Rate Monitoring of Cage-Free Layer Houses in California, Xingjun Lin, Ruihong Zhang, Shumei Jiang, Hamed M. El-Mashad, and Hongwei Xin

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Effect of fluorescent vs. poultry-specific light-emitting diode lights on production performance and egg quality of W-36 laying hens, Kai Liu, Hongwei Xin, Jasreen Sekhon, and Tong Wang

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Perch-shape preference and perching behaviors of young laying hens, Kai Liu, Hongwei Xin, Timothy A. Shepherd, and Yang Zhao

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Seasonal variation of macrolide resistance gene abundances in the South Fork Iowa River Watershed, Elizabeth Luby Rieki, Thomas B. Moorman, Elizabeth L. Douglass, and Michelle L. Soupir

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Portable canopy chamber measurements of evapotranspiration in corn, soybean, and reconstructed prairie, Chenyi Luo, Zhuangji Wang, Thomas J. Sauer, Matthew J. Helmers, and Robert Horton

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A GIS-based tool for bioaccumulation risk analysis and its application to study polychlorinated biphenyls in the Great Lakes, Fernanda P. Maciel and Joshua Peschel

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Seasonal and interannual assessment of cloud cover and atmospheric constituents across the Amazon (2000–2015): Insights for remote sensing and climate analysis, Vitor S. Martins, Evlyn M.L.M. Novo, Alexei Lyapustin, Luiz E.O.C. Aragão, Saulo R. Freitas, and Claudio C.F. Barbosa

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Continental-scale surface reflectance product from CBERS-4 MUX data: Assessment of atmospheric correction method using coincident Landsat observations, Vitor S. Martins, João V. Soares, Evlyn M.L.M. Novo, Claudio C.F. Barbosa, Cibele T. Pinto, Jeferson S. Arcanjo, and Amy Kaleita

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Improving environmental odor measurements: comparison of lab-based standard method and portable odor measurement technology, Devin L. Maurer, Alexandrea M. Bragdon, Brandon C. Short, Heekwon Ahn, and Jacek A. Koziel

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Detection of Volatile Compounds Emitted from Nasal Secretions and Serum: Towards Non-Invasive Identification of Diseased Cattle Biomarkers, Devin L. Maurer, Jacek A. Koziel, Terry J. Engelken, Vickie L. Cooper, and Jenna L. Funk

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Effects of litter floor access and inclusion of experienced hens in aviary housing on floor eggs, litter condition, air quality, and hen welfare, Jofran L. Oliveira, Hongwei Xin, Lilong Chai, and Suzanne T. Millman

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Maize and soybean root front velocity and maximum depth in Iowa, USA, Raziel A. Ordonez, Michael J. Castellano, Jerry L. Hatfield, Matthew J. Helmers, Mark A. Licht, Matthew Liebman, Ranae Dietzel, Rafael Martinez-Feria, Javed Iqbal, Laila A. Puntel, S. Carolina Cordova, Kaitlin Togliatti, Emily E. Wright, and Sotirios V. Archontoulis

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Water and Sediment Microbial Quality of Mountain and Agricultural Streams, Pramod Pandey, Michelle L. Soupir, Yi Wang, Wenlong Cao, Sagor Biswas, Venkata Vaddella, Robert Atwill, Venkatesh Merwade, and Gregory Pasternack

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Development of gluten-free egg pasta based on amaranth, maize and sorghum, Laura Paux and Kurt A. Rosentrater

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Using workers’ compensation claims data to characterize occupational injuries in the biofuels industry, Sai K. Ramaswamy and Gretchen A. Mosher

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Functional Performance Evaluation of a Novel Thermal Environment Sensor Array, Brett C. Ramirez, Y. Gao, Steven J. Hoff, and Jay D. Harmon

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Thermal environment sensor array: Part 1 development and field performance assessment, Brett C. Ramirez, Yun Gao, Steven J. Hoff, and Jay D. Harmon

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Thermal environment sensor array: Part 2 applying the data to assess grow-finish pig housing, Brett C. Ramirez, Steven J. Hoff, and Jay D. Harmon

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Determination of Selected Aromas in Marquette and Frontenac Wine Using Headspace-SPME Coupled with GC-MS and Simultaneous Olfactometry, Somchai Rice, Nanticha Lutt, Jacek A. Koziel, Murlidhar Dharmadhikari, and Anne Fennell

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Practical implications of erythromycin resistance gene diversity on surveillance and monitoring of resistance, Elizabeth L. Rieke, Jinlyung Choi, Thomas B. Moorman, Michelle L. Soupir, Heather K. Allen, Schuyler D. Smith, and Adina Howe

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Assessing Pathogen Presence in an Intensively Tile Drained, Agricultural Watershed, Elizabeth L. Rieke, Thomas Moorman, Michelle L. Soupir, F. Yang, and Adina Howe

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Temporal Dynamics of Bacterial Communities in Soil and Leachate Water After Swine Manure Application, Elizabeth L. Rieke, Michelle L. Soupir, Thomas B. Moorman, Fan Yang, and Adina C. Howe

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Impact of temperature and hydraulic retention time on pathogen and nutrient removal in woodchip bioreactors, Michelle L. Soupir, Natasha L. Hoover, Thomas B. Moorman, Ji Yeow Law, and Bradley L. Bearson