Submissions from 2019
Identification of a surrogate to validate irradiation processing of selected spices, E. V. Arias-Rios, G. R. Acuff, A. Castillo, L. M. Lucia, S. E. Niebuhr, and J. S. Dickson
Improved annotation of the domestic pig genome through integration of Iso-Seq and RNA-seq data, Hamid Beiki, Haibo Liu, J. Huang, Nancy Manchanda, D. Nonneman, T. P. L. Smith, James M. Reecy, and Christopher K. Tuggle
Heat stress during the luteal phase decreases luteal size but does not impact circulating progesterone in gilts, Katie L. Bidne, Matthew R. Romoser, Jason W. Ross, Lance H. Baumgard, and Aileen F. Keating
The impact of an introductory animal handling course on undergraduate students who lack previous livestock handling experience, J. M. Bundy, J. A. Sterle, A. K. Johnson, and G. T. Krahn
Co-Expression Networks Reveal Potential Regulatory Roles of miRNAs in Fatty Acid Composition of Nelore Cattle, Priscila S. N. de Oliveira, Luiz L. Coutinho, Aline S. M. Cesar, Wellison J. da Silva Diniz, Marcela M. de Souza, Bruno G. Andrade, James E. Koltes, Gerson B. Mourão, Adhemar Zerlotini, James M. Reecy, and Luciana C. A. Regitano
Natural Selection Footprints Among African Chicken Breeds and Village Ecotypes, Ahmed R. Elbeltagy, Francesca Bertolini, Damarius S. Fleming, Angelica Van Goor, Chirs M. Ashwell, Carl J. Schmidt, Donald R. Kugonza, Susan J. Lamont, and Max F. Rothschild
The impact of dietary supplementation of arginine during gestation in a commercial swine herd: I. Gilt reproductive performance, Elizabeth A. Hines, Matthew R. Romoser, Zoë E. Kiefer, Aileen F. Keating, Lance H. Baumgard, Jarad Niemi, Nicholas K. Gabler, John F. Patience, Benjamin Haberl, Noel H. Williams, Brian J. Kerr, Kevin J. Touchette, and Jason W. Ross
Building a livestock genetic and genomic information knowledgebase through integrative developments of Animal QTLdb and CorrDB, Zhi-Liang Hu, Carissa A. Park, and James M. Reecy
Genome-wide association study for response to vaccination in Angus calves, L. M. Kramer, M. S. Mayes, E. D. Downey, R. G. Tait Jr., A. Woolums, C. Chase, and J. M. Reecy
A novel environmental enrichment device improved broiler performance without sacrificing bird physiological or environmental quality measures, Meaghan Meyer, Anna K. Johnson, and Elizabeth A. Bobeck
Evaluation of SNP Genotyping in Alpacas Using the Bovine HD Genotyping Beadchip, Manuel More, Gustavo Gutierrez, Max Rothschild, Francesca Bertolini, and F. Abel Ponce de Leon
Dynamic space utilization for lame and non-lame gestating sows Estimated by the lying-standing sequence, Jared M. Mumm, Julia Adriana Calderón Díaz, Joseph D. Stock, Anna K. Johnson, Jack C. M. Dekkers, Alejandro Ramirez, Samaneh Azarpajouh, and Kenneth J. Stalder
Genetic analysis of production, physiological, and egg quality traits in heat-challenged commercial white egg-laying hens using 600k SNP array data, Kaylee Rowland, Chris M. Ashwell, Michael E. Persia, Max F. Rothschild, Carl Schmidt, and Susan J. Lamont
Venous blood gas and chemistry components are moderately heritable in commercial white egg-laying hens under acute or chronic heat exposure, Kaylee Rowland, Michael E. Persia, Max F. Rothschild, Carl Schmidt, and Susan J. Lamont
Conserved, breed-dependent, and subline-dependent innate immune responses of Fayoumi and Leghorn chicken embryos to Newcastle disease virus infection, Megan A. Schilling, Sahar Memari, Meredith Cavanaugh, Robab Katani, Melissa S. Deist, Jessica Radzio-Basu, Susan J. Lamont, Joram J. Buza, and Vivek Kapur
Prediction of key regulators and downstream targets of E. coli induced mastitis, Somayeh Sharifi, Abbas Pakdel, Esmaeil Ebrahimie, Yalda Aryan, Mostafa Ghaderi Zefrehee, and James M. Reecy
Validation of lethality processes for products with slow come up time: Bacon and bone-in ham, J. Sindelar, K. Glass, R. Hanson, J. G. Sebranek, J. Cordray, and J.S. Dickson
Detection of Selection Signatures Among Brazilian, Sri Lankan, and Egyptian Chicken Populations Under Different Environmental Conditions, Muhammed Walugembe, Francesca Bertolini, Chandraratne Mahinda B. Dematawewa, Matheus P. Reis, Ahmed R. Elbeltagy, Carl J. Schmidt, Susan J. Lamont, and Max F. Rothschild
Genetic Analyses of Tanzanian Local Chicken Ecotypes Challenged with Newcastle Disease Virus, Muhammed Walugembe, James R. Mushi, Esinam N. Amuzu-Aweh, Gaspar H. Chiwanga, Peter L. Msoffe, Ying Wang, Perot Saelao, Terra Kelly, Rodrigo A. Gallardo, Huaijun Zhou, Susan J. Lamont, Amandus P. Muhairwa, and Jack C. M. Dekkers
Rapid Communication: A comparison of cardiac lesions and heart weights from market pigs that did and did not die during transport to one Ontario abattoir, Kathy Zurbrigg, Tony van Dreumel, Max F. Rothschild, David Alves, Robert M. Friendship, and Terri L. O’Sullivan
Submissions from 2018
Cattle infection response network and its functional modules, Hamid Beiki, Abbas Pakdel, Ardeshir Nejati Javaremi, Ali Masoudi-Nejad, and James M. Reecy
Genome-wide patterns of homozygosity provide clues about the population history and adaptation of goats, Francesca Bertolini, Tainã Figueiredo Cardoso, Gabriele Marras, Ezequiel L. Nicolazzi, Max F. Rothschild, Marcel Amills, and AdaptMap consortium
Signatures of selection and environmental adaptation across the goat genome post-domestication, Francesca Bertolini, Bertrand Servin, Andrea Talenti, Estelle Rochat, Eui Soo Kim, Claire Oget, Isabelle Palhière, Alessandra Crisà, Gennaro Catillo, Roberto Steri, Marcel Amills, Licia Colli, Gabriele Marras, Marco Milanesi, Ezequiel Nicolazzi, Benjamin D. Rosen, Curtis P. Van Tassell, Brent Guldbrandtsen, Tad S. Sonstegard, Gwenola Tosser‑Klopp, Alessandra Stella, Max F. Rothschild, Stéphane Joost, Paola Crepaldi, and AdaptMap consortium
Disruption of female reproductive function by endotoxins, K. L. Bidne, M. J. Dickson, J. W. Ross, L. H. Baumgard, and A. F. Keating
Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals, Aniek C. Bouwman, Dorian J. Garrick, James Reecy, Curtis P. Van Tassell, and et al.
Patterns of homozygosity in insular and continental goat breeds, Taina F. Cardoso, Marcel Amills, Francesca Bertolini, Max Rothschild, Gabriele Marras, Geert Boink, Jordi Jordana, Juan Capote, Sean Carolan, Jón H. Hallsson, Juha Kantanen, Agueda Pons, Johannes A. Lenstra, and The AdaptMap Consortium
Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits, Aline S. M. Cesar, Luciana C. A. Regitano, James M. Reecy, Mirele D. Poleti, Priscila S. N. Oliveira, Gabriella B. de Oliveira, Gabriel C. M. Moreira, Maurício A. Mudadu, Polyana C. Tizioto, James E. Koltes, Elyn Fritz-Waters, Luke Kramer, Dorian Garrick, Hamid Beiki, Ludwig Geistlinger, Gerson B. Mourão, Adhemar Zerlotini, and Luiz L. Coutinho
Predicting live weight of rural African goats using body measurements, Josue Chinchilla-Vargas, M Jennifer Woodward-Greene, Curtis P. Van Tassell, Clet Wandui Masiga, and Max F. Rothschild
Genome-wide SNP profiling of worldwide goat populations reveals strong partitioning of diversity and highlights post-domestication migration routes, Licia Colli, Marco Milanesi, Andrea Talenti, Francesca Bertolini, Minhui Chen, Alessandra Crisà, Kevin Gerard Daly, Marcello Del Corvo, Bernt Guldbrandtsen, Johannes A. Lenstra, Benjamin D. Rosen, Elia Vajana, Gennaro Catillo, Stéphane Joost, Ezequiel Luis Nicolazzi, Estelle Rochat, Max F. Rothschild, Bertrand Servin, Tad S. Sonstegard, Roberto Steri, Curtis P. Van Tassell, Paolo Ajmone‑Marsan, Paola Crepaldi, Alessandra Stella, and AdaptMap Consortium
Impact of health challenges on pig growth performance, carcass characteristics, and net returns under commercial conditions, A. S. Cornelison, L. A. Karriker, N. H. Williams, B. J. Haberl, K. J. Stalder, L. L. Schulz, and J. F. Patience
An integrative transcriptome analysis indicates regulatory mRNA-miRNA networks for residual feed intake in Nelore cattle, Priscila S.N. De Oliveira, Luiz L. Coutinho, Polyana C. Tizioto, Aline S. M. Cesar, Gabriella B. de Oliveira, Wellison J. da S. Diniz, Andressa O. De Lima, James M. Reecy, Gerson B. Mourão, Adhemar Zerlotini, and Luciana C. A. Regitano
A polymorphism in the fatty acid desaturase-2 gene is associated with the arachidonic acid metabolism in pigs, Sofia Gol, Ramona N. Pena, Max F. Rothschild, Marc Tor, and Joan Estany
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture, Lisa Harper, Jacqueline Campbell, Ethalinda K. S. Cannon, Monica Poelchau, Carson Andorf, Clayton Birkett, Steve Cannon, David Grant, Zhi-Liang Hu, Gerard Lazo, Rex Nelson, Carissa Park, James Reecy, Taner Z. Sen, Doreen Ware, Margaret Woodhouse, and et al.
Impact of Mycoplasma hyopneumoniae and Lawsonia intracellularis on the performance of pigs divergently selected for feed efficiency, E. T. Helm, A. C. Outhouse, K. J. Schwartz, J. C. M. Dekkers, S. M. Lonergan, W. M. Rauw, and N. K. Gabler
Nutrient evaluation of a pork by-product and its use as environmental enrichment for managed large exotic cats, Cayla J. Iske, Cheryl M. Morris, Jessica D. Colpoys, Kelly L. Kappen, Chelsea A. Iennarella, and Anna K. Johnson
Gene Co-expression Analysis Indicates Potential Pathways and Regulators of Beef Tenderness in Nellore Cattle, Tassia Mangetti, Luciana Correia de Almeida Regitano, James E. Koltes, Aline Silva Mello Cesar, Sonia Cristina da Silva Andrade, Gerson Barreto Mourao, Gustavo Gasparin, Gabriel Costa Monteiro Moreira, Elyn Fritz-Waters, James M. Reecy, and Luiz Lehmann Coutinho
Determining the Time Required to Detect Induced Sow Lameness Using an Embedded Microcomputer-Based Force Plate System, Brady McNeil, Julia Calderón Díaz, Caitlyn Bruns, Joe Stock, Suzanne Millman, Anna Johnson, Locke Karriker, and Kenneth Stalder
Immunomodulatory effects of heat stress and lipopolysaccharide on the bursal transcriptome in two distinct chicken lines, Melissa S. Monson, Angelica Van Goor, Christopher M. Ashwell, Michael E. Persia, Max F. Rothschild, Carl J. Schmidt, and Susan J. Lamont
Integration of genome wide association studies and whole genome sequencing provides novel insights into fat deposition in chicken, Gabriel Costa Monteiro Moreira, Clarissa Boschiero, Aline Silva Mello Cesar, James M. Reecy, Thaís Fernanda Godoy, Fábio Pértille, Mônica Corrêa Ledur, Ana Silvia Alves Meira Tavares Moura, Dorian J. Garrick, and Luiz Lehmann Coutinho
A genome-wide association study reveals novel genomic regions and positional candidate genes for fat deposition in broiler chickens, Gabriel Costa Monteiro Moreira, Clarissa Boschiero, Aline Silva Mello Cesar, James M. Reecy, Thaís Fernanda Godoy, Priscila Anchieta Trevisoli, Maurício E. Cantão, Mônica Corrêa Ledur, Adriana Mércia Guaratini Ibelli, Jane de Oliveira Peixoto, Ana Silvia Alves Meira Tavares Moura, Dorian Garrick, and Luiz Lehmann Coutinho
Genetic diversity, breed composition and admixture of Kenyan domestic pigs, Fidalis Denis Mujibi, Edward Okoth, Evans K. Cheruiyot, Cynthia Onzere, Richard P. Bishop, Eric M. Fèvre, Lian Thomas, Charles Masembe, Graham Plastow, and Max Rothschild
Integrative analysis of microRNAs and mRNAs revealed regulation of composition and metabolism in Nelore cattle, Gabriella B. Oliveira, Luciana C. A. Regitano, Aline S.M. Cesar, James M. Reecy, Karina Y. Degaki, Mirele D. Poleti, Andrezza M. Felício, James E. Koltes, and Luiz L. Coutinho
Genome-wide association studies of inflammatory bowel disease in German shepherd dogs, Atiyeh Peiravan, Francesca Bertolini, Max Rothschild, Kenneth W. Simpson, Albert E. Jergens, Karin Allenspach, and Dirk Werling
Predicting aged pork quality using a portable Raman device, C. C. Santos; J. Zhao; X. Dong; S. M. Lonergan; E. Huff-Lonergan; A. Outhuse; K. B. Carlson; K. J. Prusa; C. A. Fedler; C. Yu; S. D, Shackelford; D. A. King; and T. L. Wheeler
Integration of machine learning and meta-analysis identifies the transcriptomic bio-signature of mastitis disease in cattle, Somayeh Sharifi, Abbas Pakdel, Mansour Ebrahim, James M. Reecy, Samaneh Fazeli Farsani, and Esmaeil Ebrahimie
AdaptMap: exploring goat diversity and adaptation, Alessandra Stella, Ezequiel Luis Nicolazzi, Curtis P. Van Tassell, Max F. Rothschild, Licia Colli, Benjamin D. Rosen, Tad S. Sonstegard, Paola Crepaldi, Gwenola Tosser-Klopp, Stephane Joost, Francesca Bertolini, Jim Reecy, and AdaptMap Consortium
Nursery pig behavior evaluation pre-and post injection using digital-image methodology, Shawna L. Weimer, Thomas J. Fangman, Locke A. Karriker, Kenneth J. Stalder, and Anna K. Johnson
Submissions from 2017
Risk factors for occurrence of displaced abomasum and their relation to nutritional management of Holstein dairy cattle, Behlul Behluli, Arben Musliu, Kurtesh Sherifi, Curtis R. Youngs, and Agim Rexhepi
Seroprevalence and risk factors for Coxiella burnetii, the causative agent of Q fever in the dromedary camel (Camelus dromedarius) population in Algeria, Mohammed H. Benaissa, Samir Ansel, Curtis R. Youngs, Rachid Kaidi, and Khatima Ait-Oudhia
Evaluation of the application of bovine, ovine and caprine SNP chips to dromedary genotyping, Francesca Bertolini, Ahmed Elbeltagy, and Max Rothschild
Adenine-induced hyperphosphatemia in a murine model of renal insufficiency, Elizabeth A. Bobeck, Michelle L. Piccione, Jeff W. Bishop, Tyler G. Fulmer, Denise J. Schwahn, Christian Helvig, Martin Petkovich, and Mark E. Cook
Effect of feeding three lysine to energy diets on growth, body composition and age at puberty in replacement gilts, J. A. Calderón Díaz, J. L. Vallet, R. D. Boyd, C. A. Lents, T. J. Prince, A. E. DeDecker, C. E. Phillips, G. Foxcroft, and K. J. Stalder
Postmortem protein degradation is a key contributor to fresh pork loin tenderness, K. B. Carlson, K. J. Prusa, C. A. Fedler, E. M. Steadham, A. C. Outhouse, D. A. King, E. Huff-Lonergan, and S. M. Lonergan
Maintaining the safety and quality of beef carcass meat, James S. Dickson and Gary R. Acuff
Processes to Preserve Spice and Herb Quality and Sensory Integrity During Pathogen Inactivation, Susan E. Duncan, Kayla Moberg, Kemia N. Amin, Melissa Wright, Jordan J. Newkirk, Monica A. Ponder, Gary R. Acuff, and James S. Dickson
Comparative omega-3 fatty acid enrichment of egg yolks from first-cycle laying hens fed flaxseed oil or ground flaxseed, I. J. Ehr, M. E. Persia, and E. A. Bobeck
Genomic Comparison of Indigenous African and Northern European Chickens Reveals Putative Mechanisms of Stress Tolerance Related to Environmental Selection Pressure, Damarius S. Fleming, Steffen Weigend, Henner Simianer, Annett Weigend, Max Rothschild, Carl Schmidt, Chris Ashwell, Mike Persia, James Reecy, and Susan J. Lamont
An economic analysis of sow retention in a United States breed-to-wean system, Tasha R. Gruhot, Julia A. Calderón Díaz, Tom J. Baas, Kevin C. Dhuyvetter, Lee L. Schulz, and Kenneth J. Stalder
Design and validation of a 90K SNP genotyping assay for the water buffalo (Bubalus bubalis), Daniela Iamartino, Ezequiel L. Nicolazzi, Curtis P. Van Tassell, James M. Reecy, Eric R. Fritz-Waters, James E. Koltes, Stefano Biffani, Tad S. Sonstegard, Steven G. Schroeder, Paolo Ajmone-Marsan, Riccardo Negrini, Rolando Pasquariello, Paola Ramell, Angelo Coletta, Jose F. Garcia, Ahmad Ali, Luigi Ramunno, Gianfranco Cosenza, Denise A. A. de Oliveira, Marcela G. Drummond, Eduardo Bastianetto, Alessandro Davassi, Ali Pirani, Fiona Brew, and John L. Williams
Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection, Arun Kommadath, Hua Bao, Igseo Choi, James M. Reecy, James E. Koltes, Elyn Fritz-Waters, Chris J. Eisley, Jason R. Grant, Robert R. R. Rowland, Christopher K. Tuggle, Jack C. M. Dekkers, Joan K. Lunney, Le Luo Guan, Paul Stothard, and Graham S. Plastow
Evaluation of responses to vaccination of Angus cattle for four viruses that contribute to bovine respiratory disease complex, L. M. Kramer, M. S. Mayes, E. Fritz-Waters, J. L. Williams, E. D. Downey, R. G. Tait Jr., A. Woolums, C. Chase, and J. M. Reecy
Network Analysis Reveals Putative Genes Affecting Meat Quality in Angus Cattle, Raluca G. Mateescu, Dorian J. Garrick, and James M. Reecy
Precision Medicine in Cats: Novel Niemann-Pick Type C1 Diagnosed by Whole-Genome Sequencing, D. A. Mauler, B. Gandolfi, C. R. Reinero, D. P. O'Brien, J. L. Spooner, L. A. Lyons, N. Matthew Ellinwood, Max F. Rothschild, and 99 Lives Consortium
Determination of Genetic Structure and Signatures of Selection in Three Strains of Tanzania Shorthorn Zebu, Boran and Friesian Cattle by Genome-Wide SNP Analyses, George Msalya, Eui-Soo Kim, Emmanuel L. K. Laisser, Maulilio J. Kipanyula, Erson D. Karimuribo, Lughano J. M. Kusiluka, Sebastian W. Chenyambuga, and Max F. Rothschild
Genomic footprints of dryland stress adaptation in Egyptian fat-tail sheep and their divergence from East African and western Asia cohorts, Joram M. Mwacharo, Eui-Soo Kim, Ahmed R. Elbeltagy, Adel M. Aboul-Naga, Barbara A. Rischkowsky, and Max F. Rothschild
Early-Onset Progressive Retinal Atrophy Associated with an IQCB1 Variant in African Black-Footed Cats (Felis nigripes), Annie Oh, Jacqueline W. Pearce, Barbara Gandolfi, Erica K. Creighton, William K. Suedmeyer, Michael Selig, Ann P. Bosiack, Leilani J. Castaner, Rebecca E. H. Whiting, Ellen B. Belknap, Leslie A. Lyons, N. Matthew Ellinwood, Dorian J. Garrick, Max F. Rothschild, and 99 Lives Consortium
A systematic review and meta-analysis of tenderness metrics in control groups used in comparative nutrition experiments, M. J. Powell, C. Yuan, R. S. Dzikamunhenga, R. Tarté, E. Huff-Lonergan, S. M. Lonergan, and A. M. O'Connor
A Hypothesis and Review of the Relationship between Selection for Improved Production Efficiency, Coping Behavior, and Domestication, Wendy M. Rauw, Anna K. Johnson, Luis Gomez-Raya, and Jack C. M. Dekkers
Effects of Diet and Genetics on Growth Performance of Pigs in Response to Repeated Exposure to Heat Stress, Wendy M. Rauw, E. Johana Mayorga, Soi Meng Lei, Jack C. M. Dekkers, John F. Patience, Nicholas K. Gabler, Steven M. Lonergan, and Lance H. Baumgard
Review: Effects of Ractopamine Hydrochloride (Paylean) on welfare indicators for market weight pigs, M. J. Ritter, A. K. Johnson, M. E. Benjamin, S. N. Carr, M. Ellis, L. Faucitano, T. Grandin, J. L. Salak-Johnson, D. U. Thomson, C. Goldhawk, and M. S. Calvo-Lorenzo
Physiological mechanisms through which heat stress compromises reproduction in pigs, Jason W. Ross, Benjamin J. Hale, Jacob T. Seibert, Matthew R. Romoser, Malavika K. Adur, Aileen F. Keating, and Lance H. Baumgard
Genetic parameters and expected responses to selection for components of feed efficiency in a Duroc pig line, Juan P. Sánchez, Mohamed Ragab, Raquel Quintanilla, Max F. Rothschild, and Miriam Piles
Development of an Objective Feet and Leg Conformation Evaluation Method Using Digital Imagery in Swine, J. D. Stock, J. A. Calderón Díaz, C. E. Abell, T. J. Baas, M. F. Rothschild, B. E. Mote, and K. J. Stalder
Prolapse Incidence in Swine Breeding Herds Is a Cause for Concern, China Supakorn, Joseph D. Stock, Chris Hostetler, and Kenneth J. Stalder
Genomic Analysis Suggests KITLG is Responsible for a Roan Pattern in two Pakistani Goat Breeds, Andrea Talenti, Francesca Bertolini, Jamie Williams, Muhammad Moaeen-ud-Din, Stefano Frattini, Beatrice Coizet, Giulio Pagnacco, James Reecy, Max F. Rothschild, Paola Crepaldi, and Italian Goat Consortium
Unique genetic responses revealed in RNA-seq of the spleen of chickens stimulated with lipopolysaccharide and short-term heat, Angelica Van Goor, Chris M. Ashwell, Michael E. Persia, Max F. Rothschild, Carl J. Schmidt, and Susan J. Lamont
Identification of genome-wide SNP-SNP interactions associated with important traits in chicken, Hui Zhang, Jia-Qiang Yu, Li-Li Yang, Luke M. Kramer, Xin-Yang Zhang, Wei Na, James M. Reecy, and Hui Li
Submissions from 2016
Genetic relationship between purebred and crossbred sow longevity, C. E. Abell, R. L. Fernando, T. V. Serenius, M. F. Rothschild, K. A. Gray, and K. J. Stalder
Effect of Oregano Essential Oil (Origanum vulgare subsp. hirtum) on the Storage Stability and Quality Parameters of Ground Chicken Breast Meat, Marwan Al-Hijazeen, Eun Joo Lee, Aubrey Mendonca, and Dong Uk Ahn
Effects of Tannic Acid on Lipid and Protein Oxidation, Color, and Volatiles of Raw and Cooked Chicken Breast Meat during Storage, Marwan Al-Hijazeen, Eun Joo Lee, Aubrey Mendonca, and Dong Uk Ahn
Large-scale gene co-expression network as a source of functional annotation for cattle genes, Hamid Beiki, Ardeshir Nejati-Javaremi, Abbas Pakdel, Ali Masoudi-Nejad, Zhi-Liang Hu, and James M. Reecy
Deriving Gene Networks from SNP Associated with Triacylglycerol and Phospholipid Fatty Acid Fractions from Ribeyes of Angus Cattle, Justin W. Buchanan, James M. Reecy, Dorian J. Garrick, Qing Duan, Donald C. Beitz, James E. Koltes, Mahdi Saatchi, Lars Koesterke, and Raluca G. Mateescu
Rubber mat placement in a farrowing and lactation facility: tips and techniques, Magnus Campler, Monique Pairis-Garcia, Kenneth J. Stalder, and Anna K. Johnson
Differences in the skeletal muscle transcriptome profile associated with extreme values of fatty acids content, Aline S. M. Cesar, Luciana C. A. Regitano, Mirele D. Poleti, Sónia C. S. Andrade, Polyana C. Tizioto, Priscila S. N. Oliveira, Andrezza M. Felício, Michele L. do Nascimento, Amália S. Chaves, Dante P. D. Lanna, Rymer R. Tullio, Renata T. Nassu, James E. Koltes, Eric Frtiz-Waters, Gerson B. Mourão, Adhemar Zerlotini-Neto, James M. Reecy, and Luiz L. Coutinho
Ovarian follicular dynamics in purebred and crossbred Boran cows in Ethiopia, Tamrat Degefa, Alemayehu Lemma, Jeilu Jemal, Gbremeskel Mamo, Azage Tegegne, and Curtis R. Youngs
Epimural Indicator Phylotypes of Transiently-Induced Subacute Ruminal Acidosis in Dairy Cattle, Stephan Schmitz Esser, Stefanie U. Wetzels, Evelyne Mann, Barbara U. Metzel-Zebeli, Poulad Pourazad, Muhammad Qumar, Fenja Klevenhusen, Beate Pinior, Martin Wagner, and Qendrim Zebeli
Single nucleotide variant discovery of highly inbred Leghorn and Fayoumi chicken breeds using pooled whole genome resequencing data reveals insights into phenotype differences, D. S. Fleming, J. E. Koltes, E. R. Fritz-Waters, M. F. Rothschild, C. J. Schmidt, C. M. Ashwell, M. E. Persia, J. M. Reecy, and S. J. Lamont
Genomic analysis of Ugandan and Rwandan chicken ecotypes using a 600 k genotyping array, D. S. Fleming, J. E. Koltes, A. D. Markey, C. J. Schmidt, C. M. Ashwell, M. F. Rothschild, M. E. Persia, J. M. Reecy, and S. J. Lamont
Comparison of host genetic factors influencing pig response to infection with two North American isolates of porcine reproductive and respiratory syndrome virus, Andrew S. Hess, Zeenath Islam, Melanie K. Hess, Raymond R. R. Rowland, Joan Lunney, Andrea Doeschl-Wilson, Graham S. Plastow, and Jack C. M. Dekkers
Developmental progress and current status of the Animal QTLdb, Zhi-Liang Hu, Carissa A. Park, and James M. Reecy
Antioxidant Effect of Extracts from the Coffee Residue in Raw and Cooked Meat, Ji-Hee Kim, Dong Uk Ahn, Jong Bang Eun, and Sun Hee Moon
Epistatic interactions associated with fatty acid concentrations of beef from angus sired beef cattle, Luke M. Kramer, M. A. Abdel Ghaffar, J. E. Koltes, E. R. Fritz-Waters, M. S. Mayes, A. D. Sewell, N. T. Weeks, D. J. Garrick, R. L. Fernando, L. Ma, and J. M. Reecy
The effect of antiseptic compounds on umbilical cord healing in piglets in a commercial facility, Amanda L. Robinson, Jessie D. Colpoys, Glenn D. Robinson, Elizabeth A. Hines, Leo L. Timms, Erika M. Edwards, Ken J. Stalder, Anna K. Johnson, and Howard D. Tyler
How do sow postures change when lameness is induced using a chemical synovitis model?, A. Roca, A. K. Johnson, L. A. Karriker, L. L. Timms, C. E. Abell, and K. J. Stalder
Bioinformatic analyses in early host response to Porcine Reproductive and Respiratory Syndrome virus (PRRSV) reveals pathway differences between pigs with alternate genotypes for a major host response QTL, Martine Schroyen, Christopher Eisley, James E. Koltes, Eric Fritz-Waters, Igseo Choi, Graham S. Plastow, Leluo Guan, Paul Stothard, Hua Bao, Arun Kommadath, James M. Reecy, Joan K. Lunney, Robert R. R. Rowland, Jack C. M. Dekkers, and Christopher K. Tuggle
Litter-of-origin trait effects on gilt development, J. L. Vallet, J. A. Calderón-Díaz, K. J. Stalder, C. Phillips, R. A. Cushman, J. R. Miles, L. A. Rempel, G. A. Rohrer, C. A. Lents, B. A. Freking, and D. J. Nonneman
Quantitative trait loci identified for blood chemistry components of an advanced intercross line of chickens under heat stress, Angelica Van Goor, Christopher M. Ashwell, Michael E. Persia, Max F. Rothschild, Carl J. Schmidt, and Susan J. Lamont
High-performance epistasis detection in quantitative trait GWAS, Nathan T. Weeks, Glenn R. Luecke, Brandon M. Groth, Marina Kraeva, Li Ma, Luke M. Kramer, James E. Koltes, and James M. Reecy
Submissions from 2015
Coordinated International Action to Accelerate Genome-to-Phenome with FAANG, the Functional Annotation of Animal Genomes Project, Leif Andersson, Alan Archibald, Cynthia D. Bottema, Rudiger Brauning, Shane D. Burgess, Dave W. Burt, Eduardo Casas, Hans H. Cheng, Laura Clarke, Christine Couldrey, Brian P. Dalrymple, Christine G. Elsik, Sylvain Foissac, Elisabett Giuffra, Martien A. M. Groenen, Ben J. Hayes, LuSheng S. Huang, Hassan Khatib, James W. Kijas, Heebal Kim, Joan K. Lunney, Fiona M. McCarthy, John C. McEwan, Stephen Moore, Bindu Nanduri, Cedric Notredame, Yniv Palti, Graham S. Plastow, James M. Reecy, Gary A. Rohrer, Elena Sarropoulou, Carl J. Schmidt, Jeffrey Silverstein, Ross L. Tellam, Michele Tixier-Boichard, Gwenola Tosser-Klopp, Christopher K. Tuggle, Johanna Vilkki, Stephen N. White, Shuhong Zhao, Huaijun Zhou, and The FAANG Consortium
RAPTR-SV: A Hybrid Method for the Detection of Structural Variants, Derek M. Bickhart, Jana L. Hutchison, Lingyang Xu, Robert Schnabel, Jeremy F. Taylor, James M. Reecy, Steven Schroeder, Curt P. Van Tassell, Tad S. Sonstegard, and George E. Liu
