Cantilever deflection associated with hybridization of monomolecular DNA film

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2012-02-01
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Ganapathysubramanian, Baskar
Shrotriya, Pranav
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Shrotriya, Pranav
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Mechanical Engineering
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Electrical and Computer Engineering

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The Department of Electrical Engineering was formed in 1909 from the division of the Department of Physics and Electrical Engineering. In 1985 its name changed to Department of Electrical Engineering and Computer Engineering. In 1995 it became the Department of Electrical and Computer Engineering.

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  • Department of Electrical Engineering (1909-1985)
  • Department of Electrical Engineering and Computer Engineering (1985-1995)

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Mechanical EngineeringElectrical and Computer EngineeringPlant Sciences Institute
Abstract

Recent experiments show that specific binding between a ligand and surface immobilized receptor, such as hybridization of single stranded DNA immobilized on a microcantilever surface, leads to cantilever deflection. The binding-induced deflection may be used as a method for detection of biomolecules, such as pathogens and biohazards. Mechanical deformation induced due to hybridization of surface-immobilized DNA strands is a commonly used system to demonstrate the efficacy of microcantilever sensors. To understand the mechanism underlying the cantilever deflections, a theoretical model that incorporates the influence of ligand/receptor complex surface distribution and empirical interchain potential is developed to predict the binding-induced deflections. The cantilever bending induced due to hybridization of DNA strands is predicted for different receptor immobilization densities, hybridization efficiencies, and spatial arrangements. Predicted deflections are compared with experimental reports to validate the modeling assumptions and identify the influence of various components on mechanical deformation. Comparison of numerical predictions and experimental results suggest that, at high immobilization densities, hybridization-induced mechanical deformation is determined, primarily by immobilization density and hybridization efficiency, whereas, at lower immobilization densities, spatial arrangement of hybridized chains need to be considered in determining the cantilever deflection.

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This article appeared in Zhao, Yue, Baskar Ganapathysubramanian, and Pranav Shrotriya. "Cantilever deflection associated with hybridization of monomolecular DNA film." Journal of Applied Physics 111, no. 7 (2012): 074310 and may be found at http://dx.doi.org/10.1063/1.3698204. Posted with permission.

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Sun Jan 01 00:00:00 UTC 2012
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