Degree Type

Thesis

Date of Award

2011

Degree Name

Master of Science

Department

Genetics, Development and Cell Biology

First Advisor

Volker Brendel

Abstract

A total of 3545 splicing-related proteins in 10 plant species are identified by the sequence comparison and Markov Clustering method (OrthoMCL), including 412 proteins of Arabidopsis thaliana (At), 579 proteins of Glycine max (Gm), 248 proteins of Lotus japonicus (Lj), 296 proteins of Medicago truncatula (Mt), 316 proteins of Rice Oryza sativa (Os), 330 proteins of Physcomitrella patens (Pp), 430 proteins of Populus trichocarpa (Pt), 307 proteins of Sorghum bicolour (Sb), 270 proteins of Vitis vinifera (Vv), and 365 proteins of Zea mays (Zm). Classification and detailed information on common intron positions, gene duplications, gene structures, domain structures, and chromosome locations are accessible on the Splicing-Related Genes Database (SRGD) web site.

Copyright Owner

Liping Chen

Language

en

Date Available

2012-04-06

File Format

application/pdf

File Size

122 pages

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