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Submissions from 2018

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Fluorescent nanodiamonds: past, present, and future, Masfer H. Alkahtani, Fahad Alghannam, Linkun Jiang, Abdulrahman Almethen, Arfaan A. Rampersaud, Robert Brick, Carmen L. Gomes, Marlan O. Scully, and Philip R. Hemmer

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Charts based on big data from fluid dynamics simulations provide a simple tool to estimate how far from its source a specific blood stain can be found, Daniel Attinger

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A data set of bloodstain patterns for teaching and research in bloodstain pattern analysis: Impact beating spatters, Daniel Attinger, Yu Liu, Tyler Bybee, and Kris De Brabanter

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A data set of bloodstain patterns for teaching and research in bloodstain pattern analysis: Gunshot backspatters, Daniel Attinger, Yu Liu, Ricky Faflak, Yalin Rao, Bryce A. Struttman, Kris De Brabanter, Patrick M. Comiskey, and Alex L. Yarin

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Electrochemical Glucose Sensors Enhanced by Methyl Viologen and Vertically Aligned Carbon Nanotube Channels, Benjamin J. Brownlee, Meisam Bahari, John N. Harb, Jonathan C. Claussen, and Brian D. Iverson

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Characterization of Correlated Calcium Dynamics in Astrocytes in PCL Scaffold: Application of Wavelet Transform Coherence, Bo Chen, Fenghua Tian, Nicole N. Hashemi, Marilyn C. McNamara, and Michael Cho

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Using Stereo XPTV to determine Cylindrical Particle Distribution and Velocity in a Binary Fluidized Bed, Xi Chen, Wenqi Zhong, and Theodore J. Heindel

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Theoretical and experimental investigation of forward spatter of blood from a gunshot, P. M. Comiskey, A. L. Yarin, and Daniel Attinger

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CIP2A Immunosensor Comprised of Vertically-aligned Carbon Nanotube Interdigitated Electrodes Towards Point-of-Care Oral Cancer Screening, Shaowei Ding, Suprem R. Das, Benjamin J. Brownlee, Kshama Parate, Taylor Davis, Loreen Stromberg, Edward K.L. Chan, Joseph Katz, Brian D. Iverson, and Jonathan C. Claussen

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Microstructure design using graphs, Pengfei Du, Adrian Zebrowski, Jaroslaw Zola, Baskar Ganapathysubramanian, and Olga Wodo

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A Novel Multirobot System for Plant Phenotyping, Tianshuang Gao, Hamid Emadi, Homagni Saha, Jiaoping Zhang, Alec Lofquist, Arti Singh, Baskar Ganapathysubramanian, Soumik Sarkar, Asheesh K. Singh, and Sourabh Bhattacharya

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A Novel Multirobot System for Distributed Phenotyping, Tianshuang Gao, Homagni Saha, Hamid Emadi, Jiaoping Zhang, Alec Lofquist, Arti Singh, Baskar Ganapathysubramanian, Soumik Sarkar, Asheesh Singh, and Sourabh Bhattacharya

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Flexible Laser-Induced Graphene for Nitrogen Sensing in Soil, Nate T. Garland, Eric S. McLamore, Nicholas D. Cavallaro, Deyny Mendivelso-Perez, Emily A. Smith, Dapeng Jing, and Jonathan C. Claussen

Learning localized features in 3D CAD models for manufacturability analysis of drilled holes, Sambit Ghadai, Aditya Balu, Soumik Sarkar, and Adarsh Krishnamurthy

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An explainable deep machine vision framework for plant stress phenotyping, Sambuddha Ghosal, David Blystone, Asheesh K. Singh, Baskar Ganapathysubramanian, Arti Singh, and Soumik Sarkar

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Tip-enhanced Raman scattering of DNA aptamers for Listeria monocytogenes, Siyu He, Hongyuan Li, Carmen L. Gomes, and Dmitri V. Voronine

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Actuation of chitosan-aptamer nanobrush borders for pathogen sensing, Katherine D. Hills, Daniela Alves De Oliveira, Nicholas D. Cavallaro, Carmen L. Gomes, and Eric S. McLamore

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Printed Graphene Electrochemical Biosensors Fabricated by Inkjet Maskless Lithography for Rapid and Sensitive Detection of Organophosphates, John A. Hondred, Joyce C. Breger, Nathan J. Alves, Scott A. Trammell, Scott A. Walper, Igor L. Medintz, and Jonathan C. Claussen

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A contact formulation based on a volumetric potential: Application to isogeometric simulations of atrioventricular valves, David Kamensky, Fei Xue, Chung-Hao Lee, Jinhui Yan, Yuri Bazilevs, and Ming-Chen Hsu

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Flow Shape Design for Microfluidic Devices Using Deep Reinforcement Learning, Xian Yeow Lee, Aditya Balu, Daniel Stoecklein, and Baskar Ganapathysubramanian

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Review of noninvasive methods to characterize granular mixing, Humair Nadeem and Theodore J. Heindel

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Process optimization for microstructure-dependent properties in thin film organic electronics, Spencer Pfeifer, Balaji Sesha Sarath Pokuri, Pengfei Du, and Baskar Ganapathysubramanian

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PARyOpt: A software for Parallel Asynchronous Remote Bayesian Optimization, Balaji Sesha Sarath Pokuri, Alec Lofquist, Chad M. Risko, and Baskar Ganapathysubramanian

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Post hoc support vector machine learning for impedimetric biosensors based on weak protein-ligand interactions, Yue Rong, Andrea Padron, Kyle Hagerty, Natalie Nelson, Song Chi, Nemat O. Keyhani, Joe Katz, Shoumen P. A. Datta, Carmen Gomes, and Eric S. McLamore

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Transfer Operator Theoretic Framework for Monitoring Building Indoor Environment in Uncertain Operating Conditions, Himanshu Sharma, Anthony D. Fontanini, Umesh Vaidya, and Baskar Ganapathysubramanian

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Crowdsourcing Image Analysis for Plant Phenomics to Generate Ground Truth Data for Machine Learning, Zachary D. Siegel, Naihui Zhou, Scott Zarecor, Nigel Lee, Darwin A. Campbell, Carson M. Andorf, Dan Nettleton, Carolyn J. Lawrence-Dill, Baskar Ganapathysubramanian, Iddo Friedberg, and Jonathan W. Kelly

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From Petri Dishes to Model Ecosystems, Oskar J. Siemianowski, Kara R. Lind, Xinchun Tian, Matt Cain, Songzhe Xu, Baskar Ganapathysubramanian, and Ludovico Cademartiri

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Physics-aware Deep Generative Models for Creating Synthetic Microstructures, Rahul Singh, Viraj Shah, Balaji Pokuri, Soumik Sarkar, Baskar Ganapathysubramanian, and Chinmay Hegde

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Lanthanide ions doped in vanadium oxide for sensitive optical glucose detection, Ansam J. Talib, Masfer Alkahtani, Linkun Jiang, Fahad Alghannam, Robert Brick, Carmen L. Gomes, Marlan O. Scully, Alexei V. Sokolov, and Philip R. Hemmer

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Synthesis of Graphene Nanosheets through Spontaneous Sodiation Process, Deepak-George Thomas, Emrah Kavak, Niloofar Hashemi, Reza Montazami, and Nicole N. Hashemi

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Laser Scribed Graphene Biosensor for Detection of Biogenic Amines in Food Samples Using Locally Sourced Materials, Diana C. Vanegas, Laksmi Patiño, Connie Mendez, Daniela Alves de Oliveira, Alba M. Torres, Carmen Gomes, and Eric S. McLamore

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Controlled positioning of microbubbles and induced cavitation using a dual-frequency transducer and microfiber adhesion techniques, Alex H. Wrede, Aarthy Shah, Marilyn C. McNamara, Reza Montazami, and Nicole N. Hashemi

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Shaped 3D microcarriers for adherent cell culture and analysis, Chueh-Yu Wu, Daniel Stoecklein, Aditya Kommajosula, Jonathan Lin, Keegan Owsley, Baskar Ganapathysubramanian, and Dino Di Carlo

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An anisotropic constitutive model for immersogeometric fluid–structure interaction analysis of bioprosthetic heart valves, Michael C.H. Wu, Rana Zakerzadeh, David Kamensky, Josef Kiendl, Michael S. Sacks, and Ming-Chen Hsu

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A framework for designing patient‐specific bioprosthetic heart valves using immersogeometric fluid–structure interaction analysis, Fei Xue, Simone Morganti, Rana Zakerzadeh, David Kamensky, Ferdinando Auricchio, Alessandro Reali, Thomas J.R. Hughes, Michael S. Sacks, and Ming-Chen Hsu

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Error estimates for projection-based dynamic augmented Lagrangian boundary condition enforcement, with application to fluid–structure interaction, Yue Yu, David Kamensky, Ming-Chen Hsu, Xin Yang Lu, Yuri Bazilevs, and Thomas J.R. Hughes

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Semi-automated feature extraction from RGB images for sorghum panicle architecture GWAS, Yan Zhou, Srikant Srinivasan, Seyed Vahid Mirnezami, Aaron Kusmec, Qi Fu, Lakshmi Attigala, Maria G. Salas-Fernandez, Baskar Ganapathysubramanian, and Patrick Schnable

Submissions from 2017

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A finite element approach to self-consistent field theory calculations of multiblock polymers, David M. Ackerman, Kris Delaney, Glenn H. Fredrickson, and Baskar Ganapathysubramanian

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A rapid and efficient isogeometric design space exploration framework with application to structural mechanics, J. Benzaken, Austin J. Herrema, Ming-Chen Hsu, and John A. Evans

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Industry use of virtual reality in product design and manufacturing: a survey, Leif P. Berg and Judy M. Vance

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What role for the bioeconomy in an electrified transportation sector?, Tristan R. Brown and Robert C. Brown

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Hydrodynamics of back spatter by blunt bullet gunshot with a link to bloodstain pattern analysis, P. M. Comiskey, A. L. Yarin, and Daniel Attinger

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Optimizing isotope substitution in graphene for thermal conductivity minimization by genetic algorithm driven molecular simulations, Michael Davies, Baskar Ganapathysubramanian, and Ganesh Balasubramanian

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Rapid and Label-Free Detection of Interferon Gamma via an Electrochemical Aptasensor Comprising a Ternary Surface Monolayer on a Gold Interdigitated Electrode Array, Shaowei Ding, Curtis L. Mosher, Xian Y. Lee, Suprem R. Das, Allison A. Cargill, Xiaohui Tang, Bolin Chen, Eric S. McLamore, Carmen Gomes, Jesse M. Hostetter, and Jonathan C. Claussen

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Contaminant transport at large Courant numbers using Markov matrices, Anthony D. Fontanini, Umesh Vaidya, Alberto Passalacqua, and Baskar Ganapathysubramanian

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Enabling Inkjet Printed Graphene for Ion Selective Electrodes with Postprint Thermal Annealing, Qing He, Suprem R. Das, Nathaniel T. Garland, Dapeng Jing, John A. Hondred, Allison A. Cargill, Shaowei Ding, Chandran Karunakaran, and Jonathan C. Claussen

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A framework for parametric design optimization using isogeometric analysis, Austin J. Herrema, Nelson M. Wiese, Carolyn N. Darling, Baskar Ganapathysubramanian, Adarsh Krishnamurthy, and Ming-Chen Hsu

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Enhanced enzymatic activity from phosphotriesterase trimer gold nanoparticle bioconjugates for pesticide detection, John A. Hondred, Joyce C. Breger, Nate T. Garland, Eunkeu Oh, Kimihiro Susumu, Scott A. Walper, Igor L. Medintz, and Jonathan C. Claussen

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Projection-based stabilization of interface Lagrange multipliers in immersogeometric fluid–thin structure interaction analysis, with application to heart valve modeling, David Kamensky, John A. Evans, Ming-Chen Hsu, and Yuri Bazilevs

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Immersogeometric cardiovascular fluid–structure interaction analysis with divergence-conforming B-splines, David Kamensky, Ming-Chen Hsu, Yue Yu, John A. Evans, Michael S. Sacks, and Thomas J. R. Hughes

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A farm-level precision land management framework based on integer programming, Qi Li, Guiping Hu, Talukder Jubery, and Baskar Ganapathysubramanian

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Fluid‐Induced Alignment of Carbon Nanofibers in Polymer Fibers, Mingchang Lu, Farrokh Sharifi, Nicole N. Hashemi, and Reza Montazami

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Microfibers as Physiologically Relevant Platforms for Creation of 3D Cell Cultures, Marilyn C. McNamara, Farrokh Sharifi, Alex Wrede, Daniel F. Kimlinger, Deepak George Thomas, Jonathan B. Vander Wiel, Yuanfen Chen, Reza Montazami, and Nicole N. Hashemi

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Comparison of a Virtual Game-Day Experience on Varying Devices, Jack Miller, Holly Baiotto, Anastacia MacAllister, Melynda Hoover, Gabriel Evans, Jonathan Schlueter, Vijay Kalivarapu, and Eliot H. Winer

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A real-time phenotyping framework using machine learning for plant stress severity rating in soybean, Hsiang Sing Naik, Jiaoping Zhang, Alec Lofquist, Teshale Assefa, Soumik Sarkar, David M. Ackerman, Arti Singh, Asheesh K. Singh, and Baskar Ganapathysubramanian

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Heat and Mass Transfer Effects in a Furnace-Based Micropyrolyzer, Juan Proano-Aviles, Jake K. Lindstrom, Patrick A. Johnston, and Robert C. Brown

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Deep Learning for Flow Sculpting: Insights into Efficient Learning using Scientific Simulation Data, Daniel Stoecklein, Kin Gwn Lore, Michael Davies, Soumik Sarkar, and Baskar Ganapathysubramanian

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Graphene as a flexible electrode: review of fabrication approaches, Russell Kai Liang Tan, Sean P. Reeves, Niloofar Hashemi, Deepak George Thomas, Emrah Kavak, Reza Montazami, and Nicole N. Hashemi

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Characterization of Chlorella vulgaris and Chlorella protothecoides using multi-pixel photon counters in a 3D focusing optofluidic system, Jonathan B. Vander Wiel, Jonathan D. Mikulicz, Michael R. Boysen, Niloofer Hashemi, Patrick Kalgren, Levi M. Nauman, Seth J. Baetzold, Gabrielle G. Powell, Qing He, and Nicole Nastaran Hashemi

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Modeling of a hydraulic arresting gear using fluid–structure interaction and isogeometric analysis, Chenglong Wang, Michael C. H. Wu, Fei Xu, Ming-Chen Hsu, and Yuri Bazilevs

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Rapid B-rep model preprocessing for immersogeometric analysis using analytic surfaces, Chenglong Wang, Fei Xu, Ming-Chen Hsu, and Adarsh Krishnamurthy

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Optimizing fluid–structure interaction systems with immersogeometric analysis and surrogate modeling: Application to a hydraulic arresting gear, Michael C. H. Wu, David Kamensky, Chenglong Wang, Austin J. Herrema, Fei Xu, Marco S. Pigazzini, Aekaansh Verma, Alison ` L. Marsden, Yuri Bazilevs, and Ming-Chen Hsu

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Compressible flows on moving domains: Stabilized methods, weakly enforced essential boundary conditions, sliding interfaces, and application to gas-turbine modeling, Fei Xue, George Moutsanidis, David Kamensky, Ming-Chen Hsu, Muthuvel Murugan, Anindya Ghoshal, and Yuri Bazilevs

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Computer vision and machine learning for robust phenotyping in genome-wide studies, Jiaoping Zhang, Hsiang Sing Naik, Teshale Assefa, Soumik Sarkar, R. V. Chowda Reddy, Arti Singh, Baskar Ganapathysubramanian, and Asheesh K. Singh

Submissions from 2016

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Transient Biocompatible Polymeric Platforms for Long-Term Controlled Release of Therapeutic Proteins and Vaccines, Handan Acar, Saikat Banerjee, Heliang Shi, Reihaneh Jamshidi, Nicole N. Hashemi, Michael W. Cho, and Reza Montazami

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A Multi-facetted Visual Analytics Tool for Exploratory Analysis of Human Brain and Function Datasets, Diego A. Angulo, Cyril Schneider, James H. Oliver, Nathalie Charpak, and Jose T. Hernandez

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An evaluation of asymmetric interfaces for bimanual virtual assembly with haptics, Patrick Carlson, Judy M. Vance, and Meisha N. Berg

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Platinum Nanoparticle Decorated SiO2 Microfibers as Catalysts for Micro Unmanned Underwater Vehicle Propulsion, Bolin Chen, Nathaniel T. Garland, Jason Geder, Marius Pruessner, Eric Mootz, Allison Cargill, Anne Leners, Granit Vokshi, Jacob Davis, Wyatt Burns, Michael A. Daniele, Josh Kogot, Igor L. Medintz, and Jonathan C. Claussen

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Platinum Nanoparticle Decorated SiO2 Microfibers as Catalysts for Micro Unmanned Underwater Vehicle Propulsion, Bolin Chen, Nathaniel T. Garland, Jason Geder, Marius Pruessner, Eric Mootz, Allison Cargill, Anne Leners, Granit Vokshi, Jacob Davis, Wyatt Burns, Michael A. Daniele, Josh Kogot, Igor L. Medintz, and Jonathan C. Claussen

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Prediction of blood back spatter from a gunshot in bloodstain pattern analysis, P. M. Comiskey, A. L. Yarin, S. Kim, and Daniel Attinger

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Texture and wettability of metallic lotus leaves, Christophe Frankiewicz and Daniel Attinger

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A paper-based microbial fuel cell operating under continuous flow condition, Niloofar Hashemi, Joshua M. Lackore, Farrokh Sharifi, Payton J. Goodrich, Megan L. Winchell, and Nicole N. Hashemi

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Direct immersogeometric fluid flow analysis using B-rep CAD models, Ming-Chen Hsu, Chenglong Wang, Fei Xu, Austin J. Herrema, and Adarsh Krishnamurthy

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Deploying Fourier Coefficients to Unravel Soybean Canopy Diversity, Talukder Jubery, Johnathon Shook, Kyle Parmley, Jiaoping Zhang, Hsiang S. Naik, Race Higgins, Soumik Sarkar, Arti Singh, Asheesh K. Singh, and Baskar Ganapathysubramanian

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Thermodynamics and historical relevance of a jetting thermometer made of Chinese zisha ceramic, Vincent Lee and Daniel Attinger

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Plant Growth Environments with Programmable Relative Humidity and Homogeneous Nutrient Availability, Kara R. Lind, Nigel Lee, Tom Sizmur, Oskar J. Siemianowski, Shawn Van Bruggen, Baskar Ganapathysubramanian, and Ludovico Cademartiri

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Implementing Native Support for Oculus and Leap Motion in a Commercial Engineering Visualization and Analysis Platform, Anastacia MacAllister, Siemens PLM Software, and Eliot H. Winer

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The non-symmetric Nitsche method for the parameter-free imposition of weak boundary and coupling conditions in immersed finite elements, Dominik Schillinger, Isaac Harari, Ming-Chen Hsu, David Kamensky, Stein K. F. Stoter, Yue Yu, and Ying Zhao

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Mechanical and physical properties of poly(vinyl alcohol) microfibers fabricated by a microfluidic approach, Farrokh Sharifi, Zhenhua Bai, Reza Montazami, and Nicole Nastaran Hashemi

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Designing highly structured polycaprolactone fibers using microfluidics, Farrokh Sharifi, Diamant Kurteshi, and Nicole Nastaran Hashemi

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Fiber Based Approaches as Medicine Delivery Systems, Farrokh Sharifi, Avinash C. Sooriyarachchi, Hayriye Altural, Reza Montazami, Marissa Nichole Rylander, and Nicole Nastaran Hashemi

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Atomistic clustering-ordering and high-strain deformation of an Al0.1CrCoFeNi high-entropy alloy, Aayush Sharma, Prashant Signh, Duane D. Johnson, Peter K. Liaw, and Ganesh Balasubramanian

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Electrical Stimulus Controlled Binding/Unbinding of Human Thrombin-Aptamer Complex, Pranav Shrotriya, Agnivo Gosai, Xiao Ma, and Ganesh Balasubraminian

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Machine Learning for High-Throughput Stress Phenotyping in Plants, Arti Singh, Baskar Ganapathysubramanian, Asheesh Kumar Singh, and Soumik Sarkar

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Optimization of micropillar sequences for fluid flow sculpting, Daniel Stoecklein, Chueh-Yu Wu, Donghyuk Kim, Dino Di Carlo, and Baskar Ganapathysubramanian

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The tetrahedral finite cell method: Higher-order immersogeometric analysis on adaptive non-boundary-fitted meshes, Vasco Varduhn, Ming-Chen Hsu, Martin Ruess, and Dominik Schillinger

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The tetrahedral finite cell method for fluids: Immersogeometric analysis of turbulent flow around complex geometries, Fei Xu, Dominik Schillinger, David Kamensky, Vasco Varduhn, Chenglong Wang, and Ming-Chen Hsu

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Ultrahard Polycrystalline Cubic Boron Nitride Composite through Hybrid Laser/Waterjet Heat (LWH) Treatment, Jingnan Zhao and Pranav Shrotriya

Submissions from 2015

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A Novel Framework for Visual Detection and Exploration of Performance Bottlenecks in Organic Photovoltaic Solar Cell Materials, A. Aboulhassan, D. Baum, O. Wodo, Baskar Ganapathysubramanian, A. Amassian, and M. Hadwiger

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Multi-Pixel Photon Counters for Optofluidic Characterization of Particles and Microalgae, Pouya Asrar, Marta Sucur, and Nicole N. Hashemi

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Disassembly Sequence Evaluation: A User Study Leveraging Immersive Computing Technologies, Leif P. Berg, Sara Behdad, Judy M. Vance, and Deborah Thurston

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Microfluidic Organ‐on‐a‐Chip Technology for Advancement of Drug Development and Toxicology, Jeremy D. Caplin, Norma G. Granados, Myra R. James, Reza Montazami, and Nicole Nastaran Hashemi

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Virtual Training: Learning Transfer of Assembly Tasks, Patrick E. Carlson, Anicia Peters, Stephen B. Gilbert, Judy M. Vance, and Andy Luse

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Investigation of friction mechanisms in finger pad sliding against surfaces of varying roughness, Geetha Chimata and Christian J. Schwartz

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Investigation of the effect of the normal load on the incidence of friction blisters in a skin-simulant model, Geetha Chimata and Christian J. Schwartz

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Increasing the activity of immobilized enzymes with nanoparticle conjugation, Shaowei Ding, Allison A. Cargill, Igor L. Medintz, and Jonathan C. Claussen

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Biosensing with Förster Resonance Energy Transfer Coupling between Fluorophores and Nanocarbon Allotropes, Shaowei Ding, Allison Cargill, Suprem R. Das, Igor L. Medintz, and Jonathan C. Claussen

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Hydrocarbon Liquid Production via Catalytic Hydroprocessing of Phenolic Oils Fractionated from Fast Pyrolysis of Red Oak and Corn Stover, Douglas C. Elliott, Huamin Wang, Marjorie Rover, Lysle Ervin Whitmer, Ryan G. Smith, and Robert C. Brown

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Utilizing Wide Band Gap, High Dielectric Constant Nanoparticles as Additives in Organic Solar Cells, Ryan S. Gebhardt, Pengfei Du, Akshit Peer, Mitch Rock, Michael R. Kessler, Rana Biswas, Baskar Ganapathysubramanian, and Sumit Chaudhary

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Rapid prototyping of microchannels with surface patterns for fabrication of polymer fibers, Payton J. Goodrich, Farrokh Sharifi, and Nicole N. Hashemi